SubtiBank SubtiBank
yhcE [2019-06-07 09:40:22]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yhcE [2019-06-07 09:40:22]

similar to [SW|ABC transporter] (membrane protein)
locus
BSU09050
pI
9.72
mw
29.31 kDa
protein length
253 aa Sequence Blast
gene length
762 bp Sequence Blast
function
unknown
product
[SW|ABC transporter] (membrane protein)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    980,473 981,234

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|74B0D594308D313A54C7163759628655382B1F94|yhcE]-[gene|53E29A238EC817CE9B430BDED92DE8E9746C928B|yhcF]-[gene|E71E305A0DE5AB6BE24CE47DC1ECCD99670C24D8|yhcG]-[gene|70858AED096A80C1EAEB81F4B048368B665AB515|yhcH]-[gene|BAD93C5EAD25F1A257907F4C631C02FE97C7BC89|yhcI]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A658 (yhcE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/658 NBRP B. subtilis, Japan]
  • BKE09050 ([gene|74B0D594308D313A54C7163759628655382B1F94|yhcE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAACCTAAAAAAGAATTCA, downstream forward: _UP4_GATCGTAAAGTAGAGGTGTA
  • BKK09050 ([gene|74B0D594308D313A54C7163759628655382B1F94|yhcE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAACCTAAAAAAGAATTCA, downstream forward: _UP4_GATCGTAAAGTAGAGGTGTA

    • References

  • 10092453,21815947